Resources - Code

R code for visualizations

The code below provide insight to how Project Tycho® visualizations or analyses have been generated to enable others to generate similar output. These code are available to anyone, but we request citation of the Project Tycho® paper as the source.

  • This code for the program R can be used to generate a circle diagram as used in the Project Tycho® visualizations.
  • This code for the program R can be used to generate a heatmap as used in the Project Tycho® visualizations.

 

User-created code

project-tycho-utilities: Data from Tycho Project (infectious diseases in US) into an SQLite database + demo analysis in Jupyter notebook
Created by Laurent Gautier

User-created utilities to work with Project Tycho API, available on github.

 

pycho: Python wrapper for Project Tycho MMWR repository
Created by Caitlin Rivers

User-created Python wrapper for Project Tycho API, available on github.

The Project Tycho® database is funded by the Bill & Melinda Gates Foundation and the National Institutes of Health

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